Home > Genomics > Main text

Coordinate systems in different file formats


Tag: genomics, coordinate, format

coordinate of files:

Format Coordinate Example
sam, vcf, gff, wig 1-based [3,7]
bam, bcf, bed, psl, bedgraph 0-based [2,7)

If you link this blog, please refer to this page, thanks!
Post link:https://tsinghua-gongjing.github.io/posts/genomics_coordinate.html

Previous: Job manager on cluster